Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCAGCATGCTGCT
..((((((((((((((.....&)))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018228
GeneSymbolVRTN
Binding site447,464
Score0.846
Seed1
Au0.294
Energy-20.9
Binding len17
Me-4.957
Phylopstem3.838536325
Phylopflank3.6627275050000003
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure