Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATAAGCAGGATACTGCAAG
((((((((((..(((((((((&)))))))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018229
GeneSymbolAP5M1
Binding site7029,7053
Score0.923
Seed1
Au0.574
Energy-20.4
Binding len24
Me-10.109
Phylopstem0.1618638785714286
Phylopflank0.1382308375
Longest consecutive pairings13
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure