Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGCAACAGCTGAGGCTGCC
..((((((.(((((((.....&.))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018229
GeneSymbolAP5M1
Binding site10959,10981
Score0.923
Seed1
Au0.5
Energy-20.2
Binding len16
Me-6.013
Phylopstem-0.13192685714285715
Phylopflank0.361808336375
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end3
Position3UTR
2D Structure