Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTAGCAGCCTGTTCTTTTTCTCTTTGCAGCTTGTATGTTAGGA
.((((((((((((((((((...&.))))))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018230
GeneSymbolNUP133
Binding site4691,4737
Score0.923
Seed1
Au0.559
Energy-20.1
Binding len22
Me-3.793
Phylopstem4.013471718
Phylopflank2.9157621649999994
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure