Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCTCCAGCAGCTGA
...(((((((((..(((((((&))))))).)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018230
GeneSymbolNUP133
Binding site4524,4543
Score0.923
Seed0
Au0.544
Energy-21.8
Binding len19
Me-8.661
Phylopstem2.53770487
Phylopflank2.8165991012500005
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure