Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGAGCTTGCAGCTAAGTAC
.(((((((((((((.((((((&)))))))))).))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018233
GeneSymbolOGFOD1
Binding site1851,1874
Score0.846
Seed1
Au0.632
Energy-18.7
Binding len23
Me-4.529
Phylopstem0.40030608749999996
Phylopflank-0.12695623749999999
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure