Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCATTGTGCTGTAGCTGCAT
.((((((((((((........&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018235
GeneSymbolCNDP2
Binding site3618,3639
Score0.885
Seed1
Au0.588
Energy-20.9
Binding len14
Me-5.619
Phylopstem-0.15968233333333332
Phylopflank-0.29655361625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure