Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAAAATGCAGTGTATGTCAA
...(((((((((.((((..(((&)))..)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018237
GeneSymbolCCAR1
Binding site4552,4572
Score0.923
Seed0
Au0.706
Energy-14.8
Binding len20
Me-7.804
Phylopstem0.8514534444444445
Phylopflank1.353439815
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure