Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTTACAGCTGAGATGGGGTTCAACCTCAGCTGTAT
.((((((((.(((((......&.))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018238
GeneSymbolAGK
Binding site2697,2732
Score1.0
Seed1
Au0.588
Energy-20.7
Binding len16
Me-5.269
Phylopstem-0.1818651375
Phylopflank0.0644881153625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure