Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGTGGGCAGGCAGCTGCGAG
((((((((((.(((.....((&)).....)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018241
GeneSymbolTMEM184C
Binding site139,162
Score0.846
Seed1
Au0.412
Energy-20.2
Binding len23
Me-7.731
Phylopstem0.3033894
Phylopflank0.07076981375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure