Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTGAAAGCAGGCTGCC
..((((((((..(((((((((&)))))))))..)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018246
GeneSymbolCCDC25
Binding site983,1004
Score0.846
Seed1
Au0.574
Energy-19.7
Binding len21
Me-11.129
Phylopstem-0.6034418888888889
Phylopflank-0.10869705874999996
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure