Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCATCTCCTTGGCAACTGTCTCGGCCGTGCTGCAC
.((((((.((((((((((((.&.)))))..........))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018250
GeneSymbolINTS9
Binding site1682,1722
Score0.846
Seed1
Au0.441
Energy-22.0
Binding len30
Me-6.107
Phylopstem4.746870563636363
Phylopflank5.8230063324999985
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure