Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGTGTGTGCTGGA
..((((((((((..((((....&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330636
GeneSymbolHDAC11
Binding site2456,2473
Score0.846
Seed1
Au0.426
Energy-19.6
Binding len17
Me-7.103
Phylopstem0.870118011
Phylopflank0.06974971837500002
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure