Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCATTTTTACCACACAGTCCAGTTTGCATGTATAGCTAGGA
.((((((((((.(((((((((.&.))))))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018257
GeneSymbolPCMTD2
Binding site2727,2771
Score0.923
Seed1
Au0.618
Energy-20.8
Binding len22
Me-7.14
Phylopstem0.24856627272727272
Phylopflank0.08115537500000003
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure