Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGCATTGCTTCTGCAT
.(((((..(((((..(((((.&)))))..)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018257
GeneSymbolPCMTD2
Binding site3655,3675
Score0.923
Seed0
Au0.618
Energy-19.5
Binding len20
Me-9.243
Phylopstem0.5200602
Phylopflank0.24703660750000003
Longest consecutive pairings5
Position of longest consecutive pairings15
Pairings in 3prime end5
Position3UTR
2D Structure