Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATATTTCGCTGCATTGAGCCAGA
..(((((...((((((((....&.)))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018261
GeneSymbolEXOC1
Binding site1913,1938
Score0.923
Seed0
Au0.618
Energy-19.1
Binding len16
Me-9.57
Phylopstem6.05765965
Phylopflank4.4463222587499995
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure