Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCT
..(((.((((((((.(..((.&.))..).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018261
GeneSymbolEXOC1
Binding site718,756
Score1.0
Seed0
Au0.515
Energy-21.9
Binding len20
Me-7.593
Phylopstem3.8900242499999993
Phylopflank5.7108958583749985
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure