Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTATTGCCTAGCTGCT
..(((((((.(((.((((((.&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018261
GeneSymbolEXOC1
Binding site3120,3138
Score1.0
Seed1
Au0.588
Energy-20.3
Binding len18
Me-7.056
Phylopstem-0.1041307714285714
Phylopflank0.355230905
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure