Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTACTGCCGCAGGTGCAAG
(((((.(((((((.(((.(((&)))..))).))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018262
GeneSymbolIFT122
Binding site3615,3638
Score0.846
Seed0
Au0.368
Energy-26.6
Binding len23
Me-6.695
Phylopstem4.641393714285715
Phylopflank2.8086400712499997
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure