Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGGTCTGCTGGGCTGTGAA
((((((((((((((.((((((&)))))).)).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018262
GeneSymbolIFT122
Binding site3690,3715
Score1.0
Seed1
Au0.471
Energy-22.2
Binding len25
Me-4.673
Phylopstem-0.551904594117647
Phylopflank0.3360965625000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure