Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAATCATCCTGCT
..((((....((((((((((.&))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018266
GeneSymbolTMEM39A
Binding site657,675
Score0.846
Seed0
Au0.647
Energy-18.3
Binding len18
Me-11.113
Phylopstem0.44473219999999997
Phylopflank0.18453677375000008
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure