Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAACGATTGAAGCTGCT
..((((((.(((((((..(((&)))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018272
GeneSymbolDNAI7
Binding site133,153
Score0.904
Seed1
Au0.544
Energy-19.9
Binding len20
Me-6.013
Phylopstem-0.7604567142857143
Phylopflank-0.126594928
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure