Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACTATGACCAGCAGATGGGCCAGAAGGTGCAGCTGCC
..(((((((((.((....(((&.)))...)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018284
GeneSymbolGBP3
Binding site1195,1236
Score0.923
Seed1
Au0.368
Energy-21.3
Binding len20
Me-9.272
Phylopstem-0.2697873333333334
Phylopflank0.7301975302500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure