Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCAGGGGCTGCT
..((((((.(((((((.....&)))))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354803
GeneSymbolGCK
Binding site907,923
Score0.846
Seed1
Au0.397
Energy-21.4
Binding len16
Me-6.013
Phylopstem2.24623025
Phylopflank2.9169896264999995
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end3
Position3UTR
2D Structure