Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCAGCCGCGGGGCGGACTAAGAAGGGAGCCGCCTGCTGCGAG
((((((((((((((((..(((&))).))))))))).........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018287
GeneSymbolARHGAP12
Binding site88,134
Score0.846
Seed1
Au0.324
Energy-23.7
Binding len46
Me-3.938
Phylopstem1.2976605292682926
Phylopflank1.6959003725000001
Longest consecutive pairings9
Position of longest consecutive pairings33
Pairings in 3prime end6
Position5UTR
2D Structure