Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGAAGCCGTGCTGCAGC
(((((((.((((((....(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018289
GeneSymbolVPS53
Binding site165,185
Score1.0
Seed1
Au0.353
Energy-20.5
Binding len20
Me-7.22
Phylopstem-0.16023357142857142
Phylopflank-0.16386903750000004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure