Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAACTGTACGTGAAGGTGAGAGAAAAGCTGCCAAGCTGCAT
.(((((((((((((.......&.))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018296
GeneSymbolLRRC36
Binding site442,486
Score1.0
Seed1
Au0.574
Energy-18.7
Binding len17
Me-4.762
Phylopstem1.4850305866666667
Phylopflank2.2913371274999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure