Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAAGATGCAGCTAAAGCAGT
(((((((((((.(((((((..&)))))))..)))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018301
GeneSymbolRBM41
Binding site4491,4515
Score0.923
Seed1
Au0.632
Energy-21.1
Binding len24
Me-7.284
Phylopstem-0.019387928571428587
Phylopflank0.051195590000000006
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure