Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACCGGGCCCTGTCTGTGCCGGCCGTGAGCTGCGGC
(((((((((((((((......&.))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018303
GeneSymbolEXOC2
Binding site69,108
Score0.885
Seed1
Au0.368
Energy-21.7
Binding len18
Me-4.171
Phylopstem-0.17875920000000003
Phylopflank0.005795162500000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure