Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTATGGCCCAGTGCAGT
(((((.(((.(((((((((((&))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018304
GeneSymbolPRR11
Binding site5594,5614
Score0.846
Seed0
Au0.588
Energy-20.6
Binding len20
Me-7.081
Phylopstem-0.17942872727272724
Phylopflank-0.17571377499999996
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure