Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCATTTGGGCAGTACTGCTGTGCAACCCAGCTGCAAG
(((((((((.(((((((.(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018306
GeneSymbolTMEM40
Binding site954,994
Score1.0
Seed1
Au0.397
Energy-28.3
Binding len22
Me-5.18
Phylopstem-0.06808922222222219
Phylopflank-0.1045771925
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure