Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCTCTGGATGGCAGGCTGCAAG
((((((((((.(((...((((&)).))...))).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354817
GeneSymbolSMAD1
Binding site753,777
Score0.923
Seed1
Au0.382
Energy-19.3
Binding len24
Me-7.731
Phylopstem5.890702363636362
Phylopflank5.671218815000001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure