Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCACAGCTACAGTAGCTGA
...(((((((((((((.((((&)))).))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354817
GeneSymbolSMAD1
Binding site226,248
Score0.846
Seed0
Au0.588
Energy-18.8
Binding len22
Me-6.515
Phylopstem0.178031225
Phylopflank0.47718515624999996
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure