Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCAGAGAGGTTATTTGTTTTCCCCAAATCACACAGTT
.((((...(((((((((((...&))))))))))).......................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354828
GeneSymbolPPARGC1A
Binding site1503,1542
Score0.846
Seed0
Au0.588
Energy-17.4
Binding len39
Me-9.552
Phylopstem0.6340265545454545
Phylopflank0.58112653125
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure