Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGTGGTGGCCCAGCTGCT
..(((((((.(((((((((((&))))))....)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018320
GeneSymbolRNF121
Binding site196,219
Score0.923
Seed1
Au0.368
Energy-22.2
Binding len23
Me-6.2
Phylopstem4.719577933333334
Phylopflank5.813561772499998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure