Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAATCATGTCTTCCACGAGTTCTGCATCCGTGGCTGG
...(((((((((.((((....&.)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018320
GeneSymbolRNF121
Binding site764,805
Score0.923
Seed0
Au0.471
Energy-20.2
Binding len16
Me-7.804
Phylopstem5.731922788888889
Phylopflank5.716296227499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure