Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGAGACGGCTGTAGG
((((((((((((((.......&)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354828
GeneSymbolPPARGC1A
Binding site1745,1763
Score0.846
Seed1
Au0.485
Energy-17.2
Binding len18
Me-4.906
Phylopstem1.2325153764705885
Phylopflank0.6817559474999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure