Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTTAAGAAACTGGGGAATAGAAAAATGCAACGCAGCTGTGGA
((((((((((.((((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018327
GeneSymbolSPTLC3
Binding site537,583
Score1.0
Seed1
Au0.618
Energy-21.7
Binding len18
Me-6.762
Phylopstem3.1173114
Phylopflank4.1775129825
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure