Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCACAGACAGACAGACATGTGTGTTTGTATGCTGGGTG
(((((((((((((.........&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018328
GeneSymbolMBD5
Binding site7676,7714
Score1.0
Seed1
Au0.588
Energy-18.9
Binding len15
Me-5.763
Phylopstem0.3780389538461539
Phylopflank0.5195584950000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure