Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTCTGCTAACCAGCTGCAT
.(((((((((((..(((((((&))))))).)))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018328
GeneSymbolMBD5
Binding site3186,3211
Score0.923
Seed1
Au0.574
Energy-24.2
Binding len25
Me-5.939
Phylopstem3.8471031250000003
Phylopflank2.5792307875000002
Longest consecutive pairings7
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure