Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACTGCAGCTGGAAA
((.((((((((((.((.....&)).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018328
GeneSymbolMBD5
Binding site3610,3627
Score0.923
Seed0
Au0.471
Energy-20.6
Binding len17
Me-6.352
Phylopstem3.08092771
Phylopflank4.015790441249999
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure