Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGTTGTTATATTGGCAAGGGCTGTAGACATTCTGCTCTGGTCA
.((((((((((((((.(((..&.)))..))))))))))............)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_018330
GeneSymbolSHTN1
Binding site1746,1790
Score0.974
Seed1
Au0.574
Energy-22.0
Binding len33
Me-4.026
Phylopstem-0.3575810961538461
Phylopflank-0.25286594625
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure