Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTACACCACCGCATAGTGGGCTGCAGT
(((((((((((((((((..((&))..))))..))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018342
GeneSymbolTMEM144
Binding site826,856
Score0.846
Seed1
Au0.529
Energy-21.2
Binding len30
Me-3.938
Phylopstem1.3769838879999998
Phylopflank2.0967549112499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure