Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCTGCCATGAAGGAATTTGCCTATATGAAGGCATTGTATGAGAGGA
.(((..((((((((((......&.))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_018343
GeneSymbolRIOK2
Binding site522,570
Score0.846
Seed0
Au0.632
Energy-17.9
Binding len17
Me-9.813
Phylopstem-0.5676854
Phylopflank0.20218344125000004
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure