Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCCATGGACCTGCAGCCGCAATCCTCAGATGAGCAAGTGCCGCTGCAC
.(((((((((((((((.((((&.))))))))))))).....................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018347
GeneSymbolAP5S1
Binding site449,501
Score0.923
Seed1
Au0.324
Energy-26.6
Binding len42
Me-3.793
Phylopstem1.3844439722222224
Phylopflank2.276825985
Longest consecutive pairings13
Position of longest consecutive pairings28
Pairings in 3prime end7
PositionCDS
2D Structure