Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGGTCCCTGTCTGCCGGCATTCGCGGCTGCGGG
((((((((((((.(((..(((&.))).))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018348
GeneSymbolCMTR2
Binding site4,43
Score0.846
Seed1
Au0.25
Energy-26.9
Binding len22
Me-5.227
Phylopstem0.09573991666666663
Phylopflank0.0023184149999999834
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure