Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAGGACAAGAGCCAGG
..(((((((..(((((((....&)))))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354840
GeneSymbolCXCL8
Binding site33,51
Score0.923
Seed1
Au0.485
Energy-19.2
Binding len18
Me-9.024
Phylopstem0.16132215714285714
Phylopflank0.2380294875543479
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure