Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAAACTGTTTCTGCGT
.(((((..(((((((((((((&))))))))).))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018351
GeneSymbolFGD6
Binding site6489,6511
Score1.0
Seed0
Au0.603
Energy-20.1
Binding len22
Me-7.651
Phylopstem1.7647361428571426
Phylopflank2.5749851487500006
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure