Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTATACTACTTGCCTCAGCTGTAT
.((((((((.(((.((((((.&)))....)))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018351
GeneSymbolFGD6
Binding site2989,3014
Score0.923
Seed1
Au0.574
Energy-20.0
Binding len25
Me-5.893
Phylopstem0.992227375
Phylopflank0.17359940250000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure