Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGCAGCCCAGACTCTCTTATATACTGCTGCAAA
(((((((((.((((((..(((&)))...))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001190995
GeneSymbolIPO8
Binding site880,918
Score1.0
Seed1
Au0.574
Energy-18.6
Binding len38
Me-5.18
Phylopstem0.38174510959999997
Phylopflank0.5624481121249999
Longest consecutive pairings8
Position of longest consecutive pairings24
Pairings in 3prime end6
PositionCDS
2D Structure